Wir wollen die Pflanzenprozesse verstehen, die die Wechselwirkungen zwischen Pflanzen und Mikroben steuern und die Gesundheit und Produktivität von Pflanzen bestimmen. Darüber hinaus bestimmen wir Eigenschaften von nützlichen Bakterien und Pilzen und die Wege, wie diese Eigenschaften zu einer erfolgreichen Anwendung von Mikroorganismen in nachhaltigen Pflanzenproduktionssystemen beitragen. Dazu gehört auch die Entwicklung von Strategien, wie solche Eigenschaften während der Inokulumproduktionsprozesse stabilisiert oder sogar verbessert werden können. Schließlich wollen wir die Wechselwirkung von Rhizosphärenmikroorganismen mit den physikalisch-chemischen Eigenschaften von Böden und Substraten verstehen.
MICRO.2 Nützliche Pflanzen-Mikroorganismen-Interaktionen
MICRO.2 Nützliche Pflanzen-Mikroorganismen-Interaktionen
Beschreibung
Mitarbeiter
Zusammenarbeit
Publikationen
Leiterin der FG MICRO.2: Dr. Silke Ruppel
Das übergeordnete Ziel von MICRO.2 besteht darin, die Wissensbasis für eine erfolgreiche Anwendung einzelner Stämme und gemischter Gemeinschaften von nützlichen Mikroorganismen im Gartenbau zu erhöhen. Unsere Forschung ist daher auf die drei Eckpunkte des Dreiecks Pflanze – Mikroorganismus – Umwelt ausgerichtet.
iris camehl
camehl@igzev.de
Ehemalige*r Mitarbeiter*in
Prof
Philipp Franken
franken@igzev.de
Ehemalige*r Mitarbeiter*in
KOOPERATIONSPARTNER
NAME
Standort
Land
Universität Rostock
Rostock
Deutschland
Universität Potsdam
Potsdam
Deutschland
Polish Academy of Sciences, Krakau
Krakau
Polen
Agrophysikalisches Institut, St Petersburg
St Petersburg
Russland
Leibniz-Institut für Pflanzenbiochemie: IPB Halle
Halle
Deutschland
Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK)
Gatersleben
Deutschland
Helmholtz-Zentrum für Umweltforschung GmbH - UFZ
Leipzig
Deutschland
Martin-Luther-Universität Halle/Wittenberg
Halle
Deutschland
Cameron Douala University
Douala
Kamerun
COST action Putting Halophytes to Work, Leitung: University Sussex
Brüssel
Belgien
Firma Geokonzept
Adelschlag
Deutschland
Firma Umgeodat
Halle (Saale)
Deutschland
Corpoica
Bogota
Kolumbien
Aufsätze referiert mit Begutachtungssystemen
Extension of the cylindrical root model for water uptake to non-regular root distributions
Graefe, J.; Prüfert, U.; Bitterlich, M. 2019. Extension of the cylindrical root model for water uptake to non-regular root distributions. Vadose Zone Journal 18:180127.
DOI: 10.2136/vzj2018.06.0127
→Salt stress and hydroxyectoine enhance phosphate solubilisation and plant colonisation capability of Kosakonia radicincitans.
Cruz Barrera, F.M., Jakobs-Schoenwandt, B., Gómeza, M.I., Becker, M., Patel, A., Ruppel, S. 2019: Salt stress and hydroxyectoine enhance phosphate solubilisation and plant colonisation capability of Kosakonia radicincitans. Journal of Advanced Research
Molecular and physiological control of adventitious rooting in cuttings: phytohormone action meets resource allocation.
Druege, U.; Hilo, A.; Pérez-Pérez, J. M.; Klopotek, Y.; Acosta, M.; Shahinnia, F.; Zerche, S.; Franken, P.; Hajirezaei, M. R. 2019. Molecular and physiological control of adventitious rooting in cuttings: phytohormone action meets resource allocation. Annals of Botany, mcy234.
The plant microbiome: Exploration of plant-microbe interactions for improving agricultural productivity.
Hegazi, N.A.; Hartmann, A.; Ruppel, S. 2019: Editorial. The plant microbiome: Exploration of plant-microbe interactions for improving agricultural productivity. Journal of Advanced Research
Salicornia europaea L. as an underutilized saline-tolerant plant inhabited by endophytic diazotrophs.
Hrynkiewicz, K.; Patz, S.; Ruppel, S. 2019. Salicornia europaea L. as an underutilized saline-tolerant plant inhabited by endophytic diazotrophs. Journal of Advanced Research.
RAMOSA1 Enhancer LOCUS2-mediated transcriptional repression regulates vegetative and reproductive architecture.
Liu, X.; Galli, M.; Camehl, I.; Gallavotti, A. 2019. RAMOSA1 Enhancer LOCUS2-mediated transcriptional repression regulates vegetative and reproductive architecture. Plant Physiology 179, 348-363.
Phage tail-like particles are versatile bacterial nanomachines – A mini-review.
Patz, S.; Becker, Y.; Richert-Pöggeler K.R.; Berger, B.; Ruppel, S.; Huson, H.D.; Becker, M. 2019: Phage tail-like particles are versatile bacterial nanomachines – A mini-review. Journal of Advanced Research
Culturomics of the plant prokaryotic microbiome and the dawn of plant-based culture media – A review.
Sarhan, M.S.; Hamza, M.A.; Youssef, H.H.; Patz, S.; Becker, M.; ElSawey, H.; Nemr, R.; Daanaa, H-S. A.; Mourad, E.F.; Morsi, A.T.; Abdelfadeel, M.R.; Abbas, M.T.; Fayez, M.; Ruppel, S.; Hegazi, N.A. 2019: Culturomics of the plant prokaryotic microbiome and the dawn of plant-based culture media – A review. Journal of Advanced Research
Impact of dark septate endophytes on tomato growth and nutrient uptake
Yakti, W.; Kovács, G. M.; Vági, P.; Franken, P. 2019. Impact of dark septate endophytes on tomato growth and nutrient uptake. Plant Ecology & Diversity
Atmospheric drought and low light impede mycorrhizal effects on leaf photosynthesis – a glasshouse study on tomato under naturally fluctuating environmental conditions
Bitterlich, M.; Franken, P.; Graefe, J. 2019. Atmospheric drought and low light impede mycorrhizal effects on leaf photosynthesis – a glasshouse study on tomato under naturally fluctuating environmental conditions. Mycorrhiza 29, 13-28.
DOI: 10.1007/s00572-018-0872-6
→Genotypic variation of glucosinolates and their breakdown products in leaves of Brassica rapa
Klopsch, R.; Witzel, K.; Artemyeva, A.; Ruppel, S.; Hanschen, F. 2018. Genotypic variation of glucosinolates and their breakdown products in leaves of Brassica rapa. Journal of Agricultural and Food Chemistry 66, 5481-5490.
DOI: 10.1021/acs.jafc.8b01038
→Clinical reactivity of celery cultivars in allergic patients: Role of Api g 1
Dölle, S.; Welter, S.; Ruppel, E.; Lehmann, K.; Schwarz, D.; Jensen-Jarolim, E.; Zieglmayer, P.; Franken, P.; Worm, M. 2018. Clinical reactivity of celery cultivars in allergic patients: Role of Api g 1. Clinical & Experimental Allergy 48, 424-432.
DOI: 10.1111/cea.13099
→Site-directed mutagenesis to deactivate two nitrogenase isozymes of Kosakonia radicincitans DSM16656T
Ekandjo, L.K.; Ruppel, S.; Remus, R.; Witzel, K.; Patz, S.; Becker, Y. 2018. Site-directed mutagenesis to deactivate two nitrogenase isozymes of Kosakonia radicincitans DSM16656T. Canadian Journal of Microbiology 64, 97-106.
DOI: 10.1139/cjm-2017-0532
→Successful formulation and application of plant growth-promoting Kosakonia radicincitans in maize cultivation
Berger, B.; Patz, S.; Ruppel, S.; Dietel, K.; Faetke, S.; Junge, H.; Becker, M. 2018. Successful formulation and application of plant growth-promoting Kosakonia radicincitans in maize cultivation. BioMed Research International 2018, Article ID 6439481.
DOI: 10.1155/2018/6439481
→Arbuscular Mycorrhizas: A Promising Component of Plant Production Systems Provided Favorable Conditions for their Growth
Bitterlich M, Rouphael Y, Graefe J, Franken P. 2018. Arbuscular Mycorrhizas: A Promising Component of Plant Production Systems Provided Favorable Conditions for their Growth. Frontiers in Plant Science 9:1329.
DOI: 10.3389/fpls.2018.01329
→Arbuscular mycorrhiza improves substrate hydraulic conductivity in the plant available moisture range under root growth exclusion
Bitterlich, M.; Franken, P.; Graefe J. 2018. Arbuscular mycorrhiza improves substrate hydraulic conductivity in the plant available moisture range under root growth exclusion. Frontiers in Plant Science 9:301.
DOI: 10.3389/fpls.2018.00301
→Plant materials are sustainable substrates supporting new technologies of plant-only-based culture media for in vitro culturing of the plant microbiota
Mourad, E.F.; Sarhan, M.S.; Daanaa, H-S.A.; Abdou, M.; Morsi A.T.; Abdelfadeel, M.R.; Elsawey, R.; El-Tahan, M.; Hamza, M.A.; Abbas, M.; Youssef, H.H.; Abdelhadi, A.A.; Amer W.M.; Fayez, M.; Ruppel, S.; Hegazi, N. 2018. Plant materials are sustainable substrates supporting new technologies of plant-only-based culture media for in vitro culturing of the plant microbiota. Microbes and Environments 33, 40-49.
DOI: 10.1264/jsme2.ME17135
→Blumenols as shoot markers for root symbiosis with arbuscular mycorrhizal fungi
Wang, M.; Schäfer, M.; Li, D.; Halitschke, R.; Dong, C.; McGale, E.; Paetz, C.; Song, Y.; Li, S.; Dong, J.; Heiling, S.; Groten, K.; Franken, P.; Bitterlich, M.; Harrison, M.; Paszkowski, U.; Baldwin, I. 2018. Blumenols as shoot markers for root symbiosis with arbuscular mycorrhizal fungi. eLife 2018;7:e37093.
DOI: 10.7554/eLife.37093
→Community structure and plant growth-promoting potential of cultivable bacteria isolated from Cameroon soil
Tchuisseu Tchakounté, G.V.; Berger, B.; Patz, S.; Fankem, H.; Ruppel, S. 2018. Community structure and plant growth-promoting potential of cultivable bacteria isolated from Cameroon soil. Microbiological Research 214, 47-59.
DOI: 10.1016/j.micres.2018.05.008
→Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome
Verwaaijen, B.; Wibberg, D.; Nelkner, J.; Gordin, M.; Rupp, O.;Winkler, A.; Bremges, A.; Blom, J.; Grosch, R.; Pühler, A.; Schlüter, A. 2018. Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome. Journal of Biotechnology 267, 12-18.
DOI: 10.1016/j.jbiotec.2017.12.021
→Rhizosphere competence and biocontrol effect of Pseudomonas sp. RU47 independent from plant species and soil type at the field scale
Schreiter, S.; Babin, D.; Smalla, K.; Grosch, R. 2018. Rhizosphere competence and biocontrol effect of Pseudomonas sp. RU47 independent from plant species and soil type at the field scale. Frontiers in Microbiology 9:97.
DOI: 10.3389/fmicb.2018.00097
→Arbuscular Mycorrhiza Alleviates Restrictions to Substrate Water Flow and Delays Transpiration Limitation to Stronger Drought in Tomato
Bitterlich, M.; Sandmann, M.; Graefe J. 2018. Arbuscular Mycorrhiza Alleviates Restrictions to Substrate Water Flow and Delays Transpiration Limitation to Stronger Drought in Tomato. Frontiers in Plant Science 9:154.
DOI: 10.3389/fpls.2018.00154
→Plant growth-promoting bacteria Kosakonia radicincitans mediate anti-herbivore defense in Arabidopsis thaliana
Brock, A.K.; Berger, B.; Schreiner, M.; Ruppel, S.; Mewis, I. 2018. Plant growth-promoting bacteria Kosakonia radicincitans mediate anti-herbivore defense in Arabidopsis thaliana. Planta 248, 1383-1392.
DOI: 10.1007/s00425-018-2964-0
→Beneficial root endophytic fungi increase growth and quality parameters of sweet basil in heavy metal contaminated soil
Sabra, M.; Aboulnasr, A.; Franken, P.; Perreca, E.; Wright, L.P.; Camehl, I. 2018. Beneficial root endophytic fungi increase growth and quality parameters of sweet basil in heavy metal contaminated soil. Frontiers in Plant Science 9, 1726.
DOI: 10.3389/fpls.2018.01726
→Unravelling the initial plant hormone signalling, metabolic mechanisms and plant defense triggering the endomycorrhizal symbiosis behavior
Bedini, A.; Mercy, L.; Schneider, C.; Franken, P.; Lucic-Mercy, E. 2018. Unravelling the initial plant hormone signalling, metabolic mechanisms and plant defense triggering the endomycorrhizal symbiosis behavior. Frontiers in Plant Sciences 9:1800.
DOI: 10.3389/fpls.2018.01800
→Acclimatisation of Rhizophagus irregularis enhances Zn tolerance of the fungus and the mycorrhizal plant partner
Bui, VC.; Franken, P. 2018. Acclimatisation of Rhizophagus irregularis enhances Zn tolerance of the fungus and the mycorrhizal plant partner. Frontiers in Microbiology 9:3156.
DOI: 10.3389/fmicb.2018.03156
→Data on molecular identification, phylogeny and in vitro characterization of bacteria isolated from maize rhizosphere in Cameroon
Tchuisseu Tchakounte G.V.; Berger, B.; Patz, S.; Fankem, H.; Ruppel, S. 2018. Data on molecular identification, phylogeny and in vitro characterization of bacteria isolated from maize rhizosphere in Cameroon. Data in Brief 19, 1410-1417.
DOI: 10.1016/j.dib.2018.06.003
→Comparative genomics reveal a flagellar system, a type VI secretion system and plant growth-promoting gene clusters unique to the endophytic bacterium Kosakonia radicincitans
Becker, M.; Patz, S.; Becker, Y.; Berger, B.; Drungowski, M.; Bunk, B.; Overmann, J.; Spröer, C.; Reetz, J.; Tchuisseu Tchakounté, G.V.; Ruppel, S. 2018. Comparative genomics reveal a flagellar system, a type VI secretion system and plant growth-promoting gene clusters unique to the endophytic bacterium Kosakonia radicincitans. Frontiers in Microbiology 9:1997.
DOI: 10.3389/fmicb.2018.01997
→Bacterial – Fungal Interactions: ecology, mechanisms and challenges
Deveau, A.; Bonito, G.; Uehling, J.; Paoletti, M.; Becker, M.; Bindschedler, S.; Hacquard, S.; Hervé, V.; Labbé, J.; Lastovetsky, O.; Mieszkin, S.; Millet, L.; Vajna, B.; Junier, P.; Bonfante, P.; Krom, B.P.; Olsson, S.; van Elsas, J.D.; Wick, L.Y. 2018. Bacterial – Fungal Interactions: ecology, mechanisms and challenges. FEMS Microbioloy Reviews 42, 335-352.
→Artificial inoculation of Epichloë festucae into Lolium perenne, and visualisation of endophytic and epiphyllous fungal growth
Becker, M.; Scott, B.; Green, K.; Becker, Y. 2018. Artificial inoculation of Epichloë festucae into Lolium perenne, and visualisation of endophytic and epiphyllous fungal growth. Bio-protocol 8(17): e2990.
DOI: 10.21769/BioProtoc.2990
→Antagonistic potential of fluorescent pseudomonads colonizing wheat heads against mycotoxin producing alternaria and fusaria
Müller, T.;Ruppel, S.; Behrendt, U.; Lentzsch, P.; Müller, M.E.H 2018. Antagonistic potential of fluorescent pseudomonads colonizing wheat heads against mycotoxin producing alternaria and fusaria. Frontiers in Microbiology 9:2124.
DOI: 10.3389/fmicb.2018.02124
→G3 PhyloChip analysis confirms the promise of plant-based culture media for unlocking the composition and diversity of the maize root microbiome and for recovering unculturable candidate dicisions / phyla
Sarhan, M.; Patz, S.; Hamza, M.; Youssef, H.; Mourad, E.; Fayez,M.; Murphy, B.; Ruppel, S.; Hegazi, N. 2018. G3 PhyloChip analysis confirms the promise of plant-based culture media for unlocking the composition and diversity of the maize root microbiome and for recovering unculturable candidate dicisions / phyla. Microbes and Environments 33, 317-325.
DOI: 10.1264/jsme2.ME18023
→The plant growth-promoting bacteria Kosakonia radicincitans improves fruit yield and quality of Solanum lycopersicum.
Berger, B.; Baldermann, S.; Ruppel,S. 2017. The plant growth-promoting bacteria Kosakonia radicincitans improves fruit yield and quality of Solanum lycopersicum. Journal of The Science of Food and Agriculture 97, 4865 – 4871.
DOI: 10.1002/jsfa.8357
→Connecting polyphosphate translocation and hyphal water transport points to a key of mycorrhizal functioning.
Bitterlich, M.; Franken, P. 2016. Connecting polyphosphate translocation and hyphal water transport points to a key of mycorrhizal functioning. The New Phytologist 211, 1147–1149.
doi: 10.1111/nph.13957.
→Can Adverse Effects of Acidity and Aluminum Toxicity be Alleviated by Appropriate Rootstock Selection in Cucumber?
Rouphael, Y.; Rea, E.; Cardarelli, M.; Bitterlich, M.; Schwarz, D.; Colla, G. 2016. Can Adverse Effects of Acidity and Aluminum Toxicity be Alleviated by Appropriate Rootstock Selection in Cucumber? Frontiers in Plant Science, 7:1283.
Recent progress in the use of ‘omics technologies in brassicaceous vegetables
Witzel, K.; Neugart, S.; Ruppel, S.; Schreiner, M.; Wiesner, M.; Baldermann, S. 2015. Recent progress in the use of ‘omics technologies in brassicaceous vegetables. Frontiers in Plant Science 6:244.
DOI: 10.3389/fpls.2015.00244
→The sucrose transporter SlSUT2 from tomato interacts with brassinosteroid functioning and affects arbuscular mycorrhiza formation.
Bitterlich, M., Krügel, U.; Boldt-Burisch, K.; Franken, P.; Kühn, C. 2014. The sucrose transporter SlSUT2 from tomato interacts with brassinosteroid functioning and affects arbuscular mycorrhiza formation. The Plant Journal 78, 877-889.
→Interaction of brassinosteroid functions and sucrose transporter SlSUT2 regulate the formation of arbuscular mycorrhiza
Bitterlich, M.; Krügel, U.; Boldt-Burisch, K.; Franken, P.; Kühn, C. 2014. Interaction of brassinosteroid functions and sucrose transporter SlSUT2 regulate the formation of arbuscular mycorrhiza. Plant Signaling & Behavior 9 (10), e970426.
DOI: 10.4161/15592316.2014.970426
→Progress in cultivation-independent phyllosphere microbiology.
Mueller, T.; Ruppel, S. 2014. Progress in cultivation-independent phyllosphere microbiology. FEMS Microbiology Ecology 87, 2-17
→Die Phyllosphäre – ein mikrobielles Domizil.
Ruppel, S.; Müller, T. 2013. Die Phyllosphäre – ein mikrobielles Domizil. BIOspektrum 18 (5), 479-481.
Impact of the PGPB Enterobacter radicincitans DSM 16656 on growth, glucosinolate profile and immune responses of Arabidopsis thaliana.
Brock, A.K.; Berger, B.; Mewis, I.; Ruppel, S. 2013. Impact of the PGPB Enterobacter radicincitans DSM 16656 on growth, glucosinolate profile and immune responses of Arabidopsis thaliana. Microbial Ecology 65, 661-670.
→Nitrogen supply influences plant growth and transcriptional responses induced by Enterobacter radicincitans in Solanum lycopersicum.
Berger, B.; Brock, A.-K.; Ruppel S. 2013. Nitrogen supply influences plant growth and transcriptional responses induced by Enterobacter radicincitans in Solanum lycopersicum. Plant and Soil 370 (1-2), 641-652.
→Properties of the halophyte microbiome and their implications for plant salt tolerance.
Ruppel, S.; Franken, P.; Witzel, K. 2013. Properties of the halophyte microbiome and their implications for plant salt tolerance. Functional Plant Biology 40, 940-951.
http://www.publish.csiro.au/paper/FP12355.htm
Verticillium suppression is associated with the glucosinolate composition of Arabidopsis thaliana leaves.
Witzel, K.; Hanschen, F.S.; Schreiner, M.; Krumbein, A.; Ruppel, S.; Grosch, R. 2013. Verticillium suppression is associated with the glucosinolate composition of Arabidopsis thaliana leaves. PLOS ONE 2013, PLoS ONE 8(9): e71877. doi:10.1371/journal.pone.0071877 0071877
Organic and inorganic P sources interacting with applied rhizosphere bacteria and their effects on growth and P supply of maize.
Krey, T.; Baum, C.; Ruppel, S.; Seydel, M.; Eichler-Löbermann, B. 2013. Organic and inorganic P sources interacting with applied rhizosphere bacteria and their effects on growth and P supply of maize. Communication in Soil Science and Plant Analysis 44, 3205-3215.
http://www.tandfonline.com/eprint/szARvwIue8DWecMAPcbJ/full
Single and combined applications of arbuscular mycorrhizal fungi and Enterobacter radicincitans affect nutrient uptake of faba bean and soil biological characteristics.
Almethyeb, M.; Ruppel, S.; Paulsen, H.-M.; Vassilev, N.; Eichler-Löbermann, B. 2013. Single and combined applications of arbuscular mycorrhizal fungi and Enterobacter radicincitans affect nutrient uptake of faba bean and soil biological characteristics. Landbauforschung = vTI Agriculture and Forestry Research, 3 (63), 229-234.
→Influence of soil amendment history on decomposition of recently applied organic amendments.
Nett, L.; Ruppel, S.; Ruehlmann, J.; George, E.; Fink, M. 2012. Influence of soil amendment history on decomposition of recently applied organic amendments. Soil Science Society of America Journal 76 (4), 1290-1300.
→Genome sequence of Enterobacter radicincitans DSM16656T, a plant Ggrowth-promoting endophyte.
Witzel, K.; Gwinn-Giglio, M.; Nadendla, S.; Shefchek, K.; Ruppel, S. 2012. Genome sequence of Enterobacter radicincitans DSM16656T, a plant Growth-promoting endophyte. Journal of Bacteriology 194 (19), 5469.
→The crude plant juices of desert plants are proper culture media for cultivation of rhizospheric microorganisms.
Eman, H.; Nour, E.H.; Hamza, M.A.; Fayez, M.; Monib, M.; Ruppel, S.; Hegazi, N.A. 2012. The crude plant juices of desert plants are proper culture media for cultivation of rhizospheric microorganisms. Journal of Advanced Research 3, 35-43.
Photochemical processes, carbon assimilation and RNA accumulation of sucrose transporter genes in tomato arbuscular mycorrhiza.
Boldt, K.; Pörs, Y.; Haupt, B.; Bitterlich, M.; Kühn, Chr.; Grimm, B.; Franken, P. 2011. Photochemical processes, carbon assimilation and RNA accumulation of sucrose transporter genes in tomato arbuscular mycorrhiza. Journal of Plant Physiology 168 (11), 1256-1263.
→Challenges in the investigation of the metabolic changes in Nicotiana attenuata during insect herbivory using an improved HPLC-TOF-MS method
Schoettner, M., Berger, B., Gaquerel, E., Rothe, E., Schneider, B., Zurek, G., Baldwin, I.T., Jabs, W. 2010. Challenges in the investigation of the metabolic changes in Nicotiana attenuata during insect herbivory using an improved HPLC-TOF-MS method. Journal of Biomolecular Techniques : JBT, 21(3 Suppl), S42
Interaction between plants and bacteria: Glucosinolates and phyllospheric colonization of cruciferous vegetables by Enterobacter radicincitans DSM 16656.
Schreiner, M.; Krumbein, A.; Ruppel, S. 2009. Interaction between plants and bacteria: Glucosinolates and phyllospheric colonization of cruciferous vegetables by Enterobacter radicincitans DSM 16656. Journal of Molecular Microbiology and Biotechnology 17, 124-135.
→
Monographie
The photosynthetic response of greenhouse tomato cultures under a changing environment and the implications of using arbuscular mycorrhiza
Bitterlich, M. 2016. The photosynthetic response of greenhouse tomato cultures under a changing environment and the implications of using arbuscular mycorrhiza. Humboldt Universität zu Berlin, Lebenswissenschaftliche Fakultät, 195 pp., PhD thesis.
Photosyntheseleistung in Lycopersicon esculentum in Abhängigkeit von Saccharosetransporterexpression und arbuskulärer Mykorrhiza.
Bitterlich, M. 2011. Photosyntheseleistung in Lycopersicon esculentum in Abhängigkeit von Saccharosetransporterexpression und arbuskulärer Mykorrhiza, Humboldt-Universität zu Berlin, 102 S., Masterarbeit.
Aufsätze in übrigen Zeitschriften
Kulturpflanzen als Reservoir von humanpathogenen Mikroorganismen. Natürliches Vorkommen von potentiell humanpathogenen E. coli an Bockshornklee und Kräutern
Ruppel, S.; Beutin, L; Scherwinski, A.-C.; Fayez, M.; Hegazi, N.A. 2017. Kulturpflanzen als Reservoir von humanpathogenen Mikroorganismen. Natürliches Vorkommen von potentiell humanpathogenen E. coli an Bockshornklee und Kräutern. Journal für Kulturpflanzen 69, 181.
Sammelwerke (Einzelbeiträge)
Investigating Kosakonia radicincitans DSM16656T BNF activities in pure cultures and in inoculated vegetables
Ekandjo, L. K.; Remus, R.; Becker, Y.; Witzel, K.; Patz, S.; Ruppel, S. 2018. Investigating Kosakonia radicincitans DSM16656T BNF activities in pure cultures and in inoculated vegetables. International conference on plant and molecular biology. Book of Abstracts.
Culturing the plant microbiome: The eara of artificial media is about to end and the age of plant -only- based culture media had dawned
Hegazi, N.H.; Sarhan, M. S.; Youssef, H. H.; Hamza, M. A.; Fayez, M.; Ruppel, S. 2018. Culturing the plant microbiome: The eara of artificial media is about to end and the age of plant -only- based culture media had dawned. The Plant Microbiome, Book of Abstracts, 15.
Tracing the dynamics of functional gene clusters
Patz, S.; Becker, M.; Ruppel, S.; Huson, D.H. 2018. Tracing the dynamics of functional gene clusters. PhD day at Tübingen University, Algorithms in Bioinformatics, Book of Abstracts.
Extent of compatibility between stress tolerance and melanin production in dark septate endophytes
Gaber, D. A.; Berthelot, C.; Blaudez, D.; Kovacs, G. M.; Franken, P. 2018. Extent of compatibility between stress tolerance and melanin production in dark septate endophytes. Annual Conference of the Association for General and Applied Microbiology VAAM. Book of Abstracts.
Nutrition in root-fungi interactions
Yakti, W.; Andrade-Linares, D. R.; Ngwene, B.; Bitterlich, M.; Kovács, G.M.; Franken, P. 2018. Nutrition in root-fungi interactions. Annual Conference of the Association for General and Applied Microbiology VAAM. Book of Abstracts.
Differential interaction of dark septate endophytes and fungal pathogens in vitro and in planta
Yakti, W.; Kovács, G.M.; Franken, P. 2018. Differential interaction of dark septate endophytes and fungal pathogens in vitro and in planta. IOBC-WPRS Bulletin Vol. 133, p. 121.
Interaction of dark septate endophytes with arbuscular mycorrhizal fungus Rhizoglomus irregulare
Yakti, W.; Kovács, G.M.; Franken, P. 2018. Interaction of dark septate endophytes with arbuscular mycorrhizal fungus Rhizoglomus irregulare. IOBC-WPRS Bulletin 133, 137-141.
Arbuscular mycorrhiza facilitated phosphorus acquisition by Medicago truncatula even under severe drought
Püschel, D.; Bitterlich, M.; Jansa, J. 2018. Arbuscular mycorrhiza facilitated phosphorus acquisition by Medicago truncatula even under severe drought. Ecology of Soil Microorganisms 2018, Book of Abstracts.
Ruppel, S.; Patz, S.; Becker, M.; Berger, B.; Scherwinski, A.-C.; Hegazi, N. 2018. The phyllosphere of Lepidium sativum – a habitat of human probiotic bacteria. 2nd Plant Microbiome Symposium. 19.-21. Februar, Amsterdam, Proceedings.
Ruppel, S.; Patz, S.; Becker, M.; Berger, B.; Scherwinski, A.-C.; Hegazi, N. 2018. The phyllosphere of Lepidium sativum – a habitat of human probiotic bacteria. 2nd Plant Microbiome Symposium. 19.-21. Februar, Amsterdam, Proceedings.
To be or not to be a pathogen: Differentiate true virulence factors of bacteria from false positives
Becker, M.; Becker, Y.; Ruppel, S.; Patz, S. 2018. To be or not to be a pathogen: Differentiate true virulence factors of bacteria from false positives. 3rd International Workshop on Interactions between crop plants and human pathogens. 12.-14.03.2018, Berlin, Book of Abstracts, 7.
Response of potato to the black scurf disease pathogen Rhizoctonia solani Kühn AG-3
Grosch, R.; Genzel, F.; Franken, P. 2018. Response of potato to the black scurf disease pathogen Rhizoctonia solani Kühn AG-3. 11th IMC-2018, Book of Abstracts, 389.
The phyllosphere of Lepidium sativum- a habitat of human probiotic of pathogenic bacteria?
Ruppel, S.; Patz, S.; Becker, M.; Berger, B.; Scherwinski, A.-C.; Hegazi, N. 2018. The phyllosphere of Lepidium sativum- a habitat of human probiotic of pathogenic bacteria? 3rd International Workshop on Interactions between crop plants and human pathogens. 12.-14.03.2018 Berlin, Book of Abstracts.
Deciphering the interaction between Rhizoglomus irregulare, hyphae attached phosphate-solubilizing bacteria and their impact on Solanum lycopersicum
Sharma, S.; Compant, S.; Ballhausen, M.-B.; Ruppel, S.; Franken, P. 2018. Deciphering the interaction between Rhizoglomus irregulare, hyphae attached phosphate-solubilizing bacteria and their impact on Solanum lycopersicum. VAAM Jahrestagung, 15.-18. April 2018, Wolfsburg. Book of Abstracts, 148.
Plant syrups are appropriate substrates to prepare plant-only-based culture media to improve cultivability of endophytic plant microbiome
El_Sawey, H.; Namer, R. A.; Sarhan, M. S.; Hamza, M. A.; Youssef, H. H.; El-Tahan, M.; Fayez, M.; Ruppel, S.; Hegazi, N. A. 2018. Plant syrups are appropriate substrates to prepare plant-only-based culture media to improve cultivability of endophytic plant microbiome. The Plant Microbiome, Book of Abstracts, 19.
Culturing the plant microbiome: The eara of artificial media is about to end and the age of plant -only- based culture media had dawned
Hegazi, N.H.; Sarhan, M. S.; Youssef, H. H.; Hamza, M. A.; Fayez, M.; Ruppel, S. 2018. Culturing the plant microbiome: The eara of artificial media is about to end and the age of plant -only- based culture media had dawned. The Plant Microbiome, Book of Abstracts, 15.
The plant leaf by itself is an excellent PAD-substrate for in situ cultivation of the plant microbiome
Nemr, R. A.; Elsawey, H.; Sarhan, M. S.; Youssef, H. H.; Hamza, M. A.; Ahmed, T. M.; Khalil, M.; Fayez, M.; El-Tahan, M.; El-Sahhar, K. F.; Patz, S.; Ruppel, S.; Witzel, K.; Hegazi, N. A. 2018. The plant leaf by itself is an excellent PAD-substrate for in situ cultivation of the plant microbiome. The Plant Microbiome, Book of Abstracts, 18.
In silico prediction of the potential and the risk of microbial inoculants for suatainable crop production
Patz, S.; Bağci, C.; Becker, M.; Berger, B.; Ruppel, S.; Huson, D. H. 2018. In silico prediction of the potential and the risk of microbial inoculants for suatainable crop production. International Symposium: The Plant Microbiome, Book of Abstracts, 11.
Plant pellets: A novel trategy for quick preparation of plant-only-based culture media for cultivation and value-added biomass production of rhizobacteria
Daanaa, H-S. A.; Abdou, M.; Hamza, M. A.; Sarhan, M. S.; Morsi, A. T.; Youssef, H. H.; Goda, H. A.; Abbas, M. T.; El-Tahan, M.; Fayez, M.; Ruppel, S.; Hegazi, N. A. 2018. Plant pellets: A novel trategy for quick preparation of plant-only-based culture media for cultivation and value-added biomass production of rhizobacteria. The Plant Microbiome, Book of Abstracts, 20.
Clay beads as low-tech and low-cost method for long-term microbial preservation
Abdelfadeel, M. R.; Sarhan, M.S.; Hamza, M. A.; Youssef, H. H.; Fayez, M.; Ruppel, S.; Hegazi, N. A. 2018. Clay beads as low-tech and low-cost method for long-term microbial preservation. The Plant Microbiome. Book of abstracts, 21.
Culturing with nutrient-free culture media: Echoing the plant inoculum effect into plant-only-based culture media
Mourad, E. F.; Sarhan, M. S.; Nemr, R.; Elsawy, H.; Youssef, H. H.; Hamza, M. A.; Fayez, M.; Ruppel, S.; Hegazi, N. A. 2018. Culturing with nutrient-free culture media: Echoing the plant inoculum effect into plant-only-based culture media. The Plant Microbiome, 24.
Kosakonia radicincitans DSM 16656T has a significant impact on the tomato microbiome
Becker, M.; Patz, S.; Becker, Y.; Berger, B.; Ruppel, S. 2018. Kosakonia radicincitans DSM 16656T has a significant impact on the tomato microbiome. The Plant Microbiome. Book of Abstracts, 28.
Effect of coinoculation of Rhizoglomus irregulare, and hyphae attached phosphate solubilizing bacteria on Solanum lycopersicum
Sharma, S.; Compant, S.; Ballhausen, M.-B.; Ruppel, S.; Franken, P. 2018. Effect of coinoculation of Rhizoglomus irregulare, and hyphae attached phosphate solubilizing bacteria on Solanum lycopersicum. The Plant Microbiome, Book of Abstracts, 29.
Monitoring the microbial quality and of field-grown fenugreek (Trigonella foenum graecum L.) including pathogenic E. coli under Egyptian farming conditions
Hamza, M.A.; Youssef, H. H.; Othman, A. A.; Eltahamy, A. A.; Elrehim, A. A.; Al-Afify, A. D. G.; Sarhan, M. S.; Patz, S.; El-Zanfaly, H. T.; Fayez, M.; Ruppel, S.; Hegazi, N. A. 2018. Monitoring the microbial quality and of field-grown fenugreek (Trigonella foenum graecum L.) including pathogenic E. coli under Egyptian farming conditions. The Plant Microbiome, Book of Abstracts, 44.
Community structure and plant growth-promoting potential of cultivable bacteria isolated from Cameroon soil
Tchuisseu Tchakounté, GV.; Berger, B.; Patz, S.; Fankem, H.; Ruppel, S. 2018. Community structure and plant growth-promoting potential of cultivable bacteria isolated from Cameroon soil. The Plant Microbiome, Book of Abstracts, 45.
The plant growth-promoting bacteria Kosakonia radicincitans improves fruit yield and quality of Solanum lycopersicum
Berger, B.; Baldermann, S.; Ruppel, S. 2018. The plant growth-promoting bacteria Kosakonia radicincitans improves fruit yield and quality of Solanum lycopersicum. The Plant Microbiome, Book of Abstracts, 57.
Osoadaptation and hydroxyectoine accumulation enhance endophytism of encapsulated Kosakonia radicincitans in radish plants
Cruz-Barrera, M.; Jakobs-Schoenwandt, D.; Becker, M.; Patel, A.; Serrato, J.; Gomez, M.; Ruppel, S. 2018. Osoadaptation and hydroxyectoine accumulation enhance endophytism of encapsulated Kosakonia radicincitans in radish plants. The Plant Microbiome, Book of Abstracts, 58.
Functional diversity of root colonizing fungi
Franken, P.; Bitterlich, M.; Gaber, D.; Shahriyari, H.; Yakti, W. 2018. Functional diversity of root colonizing fungi. The Plant Microbiome, Abstract Book, 26.
Dark septate endophytes (DSEs) responses to abiotic stress and their role in alleviation of salt stress in tomato plant
Gaber, D. A.; Berthelot, C.; Blaudez, D.; Kovacs, G. M.; Franken, P. 2018. Dark septate endophytes (DSEs) responses to abiotic stress and their role in alleviation of salt stress in tomato plant. The Plant Microbiome, Abstract Book, 70.
Compatible solutes accumulation capacity of the endophytic bacteria Kosakonia radicincitans
Cruz Barrera, F.M.; Jakobs-Schönwandt, D; Ruppel, S.; Becker, M.; Berger, B.; Junge, H.; Dietel, K.; Patel, A. 2017. Compatible solutes accumulation capacity of the endophytic bacteria Kosakonia radicincitans. Tropentag 2017: Future Agriculture: Social-ecological transitions and bio-cultural shifts. 20.-22.09.2017, Bonn. Book of Abstracts.
Primary metabolism in arbuscular mycorrhizal symbiosis: carbon, nitrogen and sulphur
Bitterlich, M.; Gräfe, J.; Franken, P. 2017. Primary metabolism in arbuscular mycorrhizal symbiosis: carbon, nitrogen and sulphur. In: Martin, F. (ed). Molecular Mycorrhizal Symbiosis, Wiley, Hoboken NJ, 217-238.
ISBN: 978-1-118-95141-5
Differential interaction of dark septate endophytes and fungal pathogens in vitro and in planta
Yakti, W.; Kovács, G.M.; Franken, P. 2017. Differential interaction of dark septate endophytes and fungal pathogens in vitro and in planta. 9th International Conference on Mycorrhiza. Book of Abstracts.
Stress acclimatization and melanin production of Dark Septate Endophytes
Gaber, D.; Berthelot, C.; Blaudez, D.; Kovács, G.M.; Franken, P. 2017. Stress acclimatization and melanin production of Dark Septate Endophytes. 9th International Conference on Mycorrhiza. Book of Abstracts.
Decoding the interaction between root endophytic fungi and beneficial bacteria
Sharma, S.; Ballhausen, M.B.; Ruppel, S.; Franken, P. 2017. Decoding the interaction between root endophytic fungi and beneficial bacteria. 9th International Conference on Mycorrhiza. Book of Abstracts.
Tit for tat: Nutrient exchange in root-endophyte interactions
Franken, P.; Bitterlich, M.; Andrade-Linares, D.R.; Kressner, S.; Kühn, C.; Ngwene, B.; Yakti, W. 2017. Tit for tat: Nutrient exchange in root-endophyte interactions. Sustain: endophytes for a growing world. Book of Abstracts.
Investigating two nitrogenase isozymes of Kosakonia radicincitans DSM16656T
Ekandjo, L.K., 2017. Investigating two nitrogenase isozymes of Kosakonia radicincitans DSM16656T. Microbe-assisted crop production – opportunities, challenges and needs. Vienna, 04.-07.12.2017. Book of Abstracts 115.
The role of the anfH and nifH genes of the plant growth-promoting bacterium Kosakonia radicincitans DSM16656T cultured under standard biological nitrogen fixation growth conditions
Ekandjo, L.K. 2017. The role of the anfH and nifH genes of the plant growth-promoting bacterium
Kosakonia radicincitans DSM16656T cultured under standard biological
nitrogen fixation growth conditions. 20th International Congress on Nitrogen Fixation. Book of Abstracts 75.
Community structure and plant growth-promoting potential of cultivable bacteria isolated from Cameroon soil
Tchuisseu Tchakounté, GV.; Berger, B.; Patz, S.; Fankem ,H.; Ruppel, S. 2017. Community structure and plant growth-promoting potential of cultivable bacteria isolated from Cameroon soil. Communicating Science-Connecting Worlds, Plants and People Conference. Book of Abstracts, 77.
Maize (Zea mays) growth promotion by rock-phosphate solubilizing bacteria isolated from nutrient deficient soils of Cameroon
Tchuisseu Tchakounté, G.V.; Berger, B.; Fankem, H.; Silke, R., 2016. Maize (Zea mays) growth promotion by rock-phosphate solubilizing bacteria isolated from nutrient deficient soils of Cameroon. 7th European Plant Science Retreat, June 20 – 23, 2016, book of abstracts, p. 54.
Maize (Zea mays) growth promotion by rock-phosphate solubilizing bacteria isolated from nutrient deficient soils of Cameroon
Tchuisseu Tchakounté, GV.; Fankem ,H.; Berger, B.; Ruppel, S. 2016. Maize (Zea mays) growth promotion by rock-phosphate solubilizing bacteria isolated from nutrient deficient soils of Cameroon. 7th European Plant Science Retreat. Book of Abstracts, 54.
Phosphate solubilizing microorganisms as fertility tools for nutrient deficient soils of Cameroon
Tchuisseu Tchakounté, GV.;Fankem, H.; Berger, B.; Ruppel, S. 2016. Phosphate solubilizing microorganisms as fertility tools for nutrient deficient soils of Cameroon. Phosphorus 2020 – Challenges for Synthesis, Agriculture, and Ecosystems 8th International Phosphorus Workshop (IPW8). Book of Abstracts, 187.
Genetic approaches for enhancement of phosphorus use efficiency in wheat.
Abhishek, D.; Behl, R.K.; Sethi, S.K.; Röder, M.; Ruppel, S. 2014. Genetic approaches for enhancement of phosphorus use efficiency in wheat. In: R.K. Behl, A.R. Asif and W. Merbach (Eds.), Cutting edge science and technology for food, environment and health, Agrobios (International) Publishers, Jodhpur, India, pp 147-157.
Sammelwerke (Herausgeberschaft)
Humusproduktion, pflanzliche Nährstoffdynamik und Rhizosphäre.
Merbach, W.; Ruppel, S.; Augustin, J. (Hrsg.) 2013. Humusproduktion, pflanzliche Nährstoffdynamik und Rhizosphäre. 23. Borkheider Seminar zur Ökophysiologie des Wurzelraumes. (Mitteilungen Agrarwissenschaften ; 24), Verlag Köster, Berlin, 190 S.
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